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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs17083824 chr5:93950667 A/C 4.46E-5 404 14.78 17.73 9.8 KM Plot
LGG rs17083825 chr5:93956839 C/T 4.34E-5 405 14.8 17.73 9.8 KM Plot
LGG rs17083826 chr5:93957831 A/G 4.34E-5 405 14.8 17.73 9.8 KM Plot
LGG rs17083896 chr5:94011244 A/G 4.32E-5 407 14.78 17.63 9.8 KM Plot
LGG rs17083911 chr5:94016287 A/G 4.03E-5 407 9.8 17.73 14.77 KM Plot
LGG rs17093090 chr14:96111826 C/T 3.16E-5 407 15.37 14.03 0 KM Plot
LGG rs17094011 chr14:74392128 A/G 2.05E-7 404 14.77 17.12 3.93 KM Plot
LGG rs17100536 chr14:63392992 A/G 3.45E-5 407 15.23 16.47 6.63 KM Plot
LGG rs17100689 chr14:33810034 G/T 2.31E-6 407 16.27 10.98 10.52 KM Plot
LGG rs17103575 chr10:124239149 A/G 0.000225 407 0.77 16.77 15.17 KM Plot
LGG rs17137318 chr16:4895038 A/G 3.24E-6 407 7.8 14.97 15.33 KM Plot
LGG rs17157040 chr11:62015275 A/G 0.000202 405 15.17 23.43 4.68 KM Plot
LGG rs17158328 chr10:43465043 A/G 0.00022 396 15.63 15.23 6.83 KM Plot
LGG rs17159950 chr10:875287 T/G 3.87E-5 405 15.17 17.75 12.17 KM Plot
LGG rs17159970 chr10:935601 T/C 4.13E-6 404 15.13 17.73 10.57 KM Plot